[GSAS-II] BUG report: error thrown in refinement
Ivo Alxneit
ivo.alxneit at psi.ch
Fri Nov 3 08:54:11 CDT 2017
Dear all
I get the following error in my refinement(s) as soon as I switch to
"analytic jacobian" in the controls menue.
Traceback (most recent call last):
File "/fast_home/alxneit/GSAS-II/GSASIIdataGUI.py", line 4320, in OnRefine
OK,Msg = G2stMn.Refine(self.GSASprojectfile,dlg) #Msg is Rvals
dict if Ok=True
File "/fast_home/alxneit/GSAS-II/GSASIIstrMain.py", line 216, in Refine
rigidbodyDict,parmDict,varyList,calcControls,pawleyLookup,ifPrint,printFile,dlg)
File "/fast_home/alxneit/GSAS-II/GSASIIstrMain.py", line 72, in RefineCore
args=([Histograms,Phases,restraintDict,rigidbodyDict],parmDict,varyList,calcControls,pawleyLookup,dlg))
File
"/fast_home/alxneit/miniconda3/envs/gsas/lib/python2.7/site-packages/scipy/optimize/minpack.py",
line 390, in leastsq
_check_func('leastsq', 'Dfun', Dfun, x0, args, n, (n, m))
File
"/fast_home/alxneit/miniconda3/envs/gsas/lib/python2.7/site-packages/scipy/optimize/minpack.py",
line 40, in _check_func
raise TypeError(msg)
TypeError: leastsq: there is a mismatch between the input and output
shape of the 'Dfun' argument 'dervRefine'.Shape should be (28, 22640)
but it is (28, 45280).
My setup
GSAS-II binary directory: /fast_home/alxneit/GSAS-II/bin
4 values read from config file /fast_home/alxneit/GSAS-II/config.py
Python module versions loaded:
Python: 2.7.14
wx: 3.0.0.0
matplotlib: 2.0.2
numpy: 1.13.3
scipy: 0.19.1
OpenGL: 3.1.1a1
PIL.Image: 1.1.7
Platform: linux2 64bit x86_64
This is GSAS-II revision 3135
The .gpx file is available at
https://app.box.com/s/0x82g4nkspwnwstjyb3g3raz9hbyvc4f
greetings
--
Dr. Ivo Alxneit
Catalysis for Energy Group
Bioenergy and Catalysis Laboratory phone: +41 56 310 4092
Paul Scherrer Institute fax: +41 56 310 2688
CH-5232 Villigen gnupg key: 0x515E30C7
Switzerland
https://www.psi.ch/ceg/
-------------- next part --------------
A non-text attachment was scrubbed...
Name: signature.asc
Type: application/pgp-signature
Size: 181 bytes
Desc: OpenPGP digital signature
URL: <http://mailman.aps.anl.gov/pipermail/gsas-ii/attachments/20171103/6872c79b/attachment.sig>
More information about the GSAS-II
mailing list