[GSAS-II] [EXTERNAL] GSAS-II on Linux
Miguel A. Camblor
macamblor at icmm.csic.es
Mon Aug 4 09:07:46 CDT 2025
Dear Yuanpeng, Carlo, Brian and Alexander
Thanks a lot to you all for your help.
Following Yuanpeng's procedure I got the program working. For the
current version, 5818, the data tab under phase didn't render well and
I could not input any data there. However, after going back to the
previous version (5817) I could. What I can still not do is to draw
the structure (it doesn't even take the background color selected). I
have a lot of Gtk-warnings.
Following Carlo's procedure when I try sudo python3 gitstrap.py the
system says it needs matplotlib and OpenGL. But when I try to install
those I got ERROR: No matching distribution found for OpenGL
Alexander noticed that while he uses an old version of GSAS-II (5799,
which I can't reach) during instalation numpy got upgraded to version
2.2.6, while mine is 1.26.4. When I follow Yuanpeng's procedure I got
numpy updated to 2.3.2, so I think this might be a good clue to the
problem.
I will keep testing GSAS-II in my system.
Thanks again to all.
Miguel
"Zhang, Yuanpeng" <zhangy3 at ornl.gov> escribió:
> Hi Miguel,
>
> I was walking through the installation of GSAS-II on my Ubuntu
> machine as created the following blog post,
>
> https://urldefense.us/v3/__https://iris2020.net/2025-08-01-gsasii_on_linux/__;!!G_uCfscf7eWS!YcH4m3HebQYUf6-qjgbxGkZpRVk1Pi9N5edx4vISVUB77d51qfEJrhAbbgsB1bBFeTEKaZK_EEv6Wg7aOhQX5GRVWQ$
>
> to cover literally all my trials until getting it working. I hope
> that will be somewhat helpful.
>
> Cheers,
> Yuanpeng
>
>
>
> --
>
>
>
> DR. YUANPENG ZHANG
>
> Neutron Scattering Scientist
>
> Spallation Neutron Source
>
>
>
> OAK RIDGE NATIONAL LABORATORY
>
> 1 bethel valley road, Oak Ridge, TN 37830, US
>
> Mobile: +1(865)-335-4818
>
> Email: _zhangy3 at ornl.gov_ | Web: _https://urldefense.us/v3/__https://me.iris-home.net___;!!G_uCfscf7eWS!YcH4m3HebQYUf6-qjgbxGkZpRVk1Pi9N5edx4vISVUB77d51qfEJrhAbbgsB1bBFeTEKaZK_EEv6Wg7aOhRpTbp19w$
>
> FROM: GSAS-II <gsas-ii-bounces at aps.anl.gov> on behalf of
> Miguel A. Camblor via GSAS-II <gsas-ii at aps.anl.gov>
> DATE: Friday, August 1, 2025 at 05:14
> TO: gsas-ii at aps.anl.gov <gsas-ii at aps.anl.gov>
> SUBJECT: [EXTERNAL] [GSAS-II] GSAS-II on Linux
>
> This Message Is From an External Sender
> This email was sent from a non-ORNL address. If suspicious,
> use the Report Phish button in Outlook.
>
>
>
> This Message Is From an External Sender
> This message came from outside your organization.
>
>
>
> Dear all
>
> I am trying to use GSAS-II on my Linux Debian 11 but I get
> segmentation fault errors that stop it. I am using the latest version
>
> Python: 3.11.8 from /home/msax/miniconda3/envs/gsas2env/bin/python.
> wx: 4.2.3
> matplotlib: 3.10.3
> numpy: 1.26.4
> scipy: 1.16.0
> OpenGL: 3.1.9
> Image: 11.3.0 (PIL or Pillow)
> Platform: linux 64bit x86_64
> Max threads:4
> GSAS-II: 5818/v5.5.0 posted 31-Jul-25 16:38 (no new updates) [07d17120]
>
> If anyone is successfully using GSAS-II on linux, please let me know
> which distribution or solution works.
>
> Cheers
> Miguel
>
>
> Miguel A. Camblor
> Institute of Materials Science of Madrid
> Spanish National Research Council-CSIC
> Sor Juana Inés de la Cruz, 3
> Cantoblanco, 28049 Madrid, Spain.
> TEL: +34 91 334 9037
> FAX: +34 91 372 0623
> /Nanostructured Hybrid, Biohybrid & and Porous Materials[1]/
> /Funk & Jazz & Science[2]/
> /Google Scholar Profile[3]/
Vínculos:
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[1]
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[2]
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[3]
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